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| author | Evan Cheng <evan.cheng@apple.com> | 2006-09-20 23:43:34 +0000 |
|---|---|---|
| committer | Evan Cheng <evan.cheng@apple.com> | 2006-09-20 23:43:34 +0000 |
| commit | bba38b084fa2a907d55fbd6fb986ef243a8edf9a (patch) | |
| tree | 3823e027e15f1f3e0ed1a388b6f50200be322972 /External/HMMER | |
| parent | 643c8467cdfe59ca3f495096bbfe059675497319 (diff) | |
Adding HMMER as an external test.
git-svn-id: https://llvm.org/svn/llvm-project/test-suite/trunk@30551 91177308-0d34-0410-b5e6-96231b3b80d8
Diffstat (limited to 'External/HMMER')
| -rw-r--r-- | External/HMMER/Makefile | 16 | ||||
| -rw-r--r-- | External/HMMER/README | 2 |
2 files changed, 18 insertions, 0 deletions
diff --git a/External/HMMER/Makefile b/External/HMMER/Makefile new file mode 100644 index 00000000..230d03e1 --- /dev/null +++ b/External/HMMER/Makefile @@ -0,0 +1,16 @@ +LEVEL = ../.. + +include $(LEVEL)/Makefile.config + +PROG = hmmcalibrate +SourceDir := $(HMMER_ROOT) + +CPPFLAGS = -DSSE2 + +ifdef LARGE_PROBLEM_SIZE +RUN_OPTIONS = --fixed 400 --cpu 1 --num 200000 $(HMMER_ROOT)/globin.hmm +else +RUN_OPTIONS = --fixed 400 --cpu 1 --num 80000 $(HMMER_ROOT)/globin.hmm +endif + +include $(LEVEL)/MultiSource/Makefile.multisrc diff --git a/External/HMMER/README b/External/HMMER/README new file mode 100644 index 00000000..fa8f94b1 --- /dev/null +++ b/External/HMMER/README @@ -0,0 +1,2 @@ +HMMER - profile hidden Markov models for biological sequence analysis +http://hmmer.wustl.edu/ |